Benchmarking:
The same data were analyzed by both FastBMD and BMDExpress 2 to evaluate the performance against an established software
Tutorial:
An example analysis conducted with FastBMD
Statistical Backend
Majority of the statistical analyses are based on R (4.0.5) using R packages below: "limma", "vsn", "edgeR", "DESeq2", "lattice", "Cairo", "stringr",
"RColorBrewer", "data.table","compiler", "genefilter", "preprocessCore", "RJSONIO"
Web Framework
The web application has been developed based on JavaServer Faces (JSF) using libraries below:
"PrimeFaces (v11)", "jQuery EasyUI", "Sigma.js", "EChart.js", "CanvasXpress"
Server Information
FastBMD is currently hosted on a Google Cloud Engine optimized for high-performance computing